ixgbe: Prevent KR PHY reset in ixgbe_init_phy_ops_x550em

This patch removes KR PHY reset from ixgbe_init_phy_ops_x550em,
since this function is meant to initialize function pointers for
the detected PHY type. Internal PHY reset was moved to
ixgbe_setup_internal_phy_t_x550em which will now detect which
mode the internal PHY operates in and set it up as required.

Signed-off-by: Mark Rustad <mark.d.rustad@intel.com>
Tested-by: Darin Miller <darin.j.miller@intel.com>
Signed-off-by: Jeff Kirsher <jeffrey.t.kirsher@intel.com>